Author

C. Frioux

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Open access Sep 2026

Accurate MAG reconstruction from a complex soil microbiome through combined short- and HiFi long-reads metagenomics

The results demonstrate that the integration of HiFi-LR and SR sequencing markedly enhances genome recovery and binning accuracy in a highly diverse environment such as soil, underscores the value of adopting long-read technologies for more comprehensive characterization of complex microbial communities.

Carole Belliardo, N. Maurice, A. Péré et al. · Environmental Microbiome · 0 citations

Ground-truth Construction and Evaluation of LLM Contribution to Life Sciences Tool Annotation

This work compares the respective capabilities of domain experts and of an Large Language Model (LLM) agent to generate useful domain-specific annotations for classifying, indexing, and searching scientific resources, and shows the complementarity between domain experts and LLMs.

Ulysse Le Clanche, Melvin Selim Atay, Elise Bannier et al. · 0 citations

Open access Jan 2026

Integrating metagenome-scale metabolic models and metabolomics to explore candidate biochemical interactions in cultivated Microcystis phycospheres

These findings deepen the understanding of Microcystis’ phycosphere functioning and demonstrate the value of multi-omics systems biology approaches, while suggesting that metabolic complementarity between species and across phycospheres could play a role in bloom-associated microbiome structure.

Juliette Audemard, Nicolas Creusot, Julie Leloup et al. · ISME Communications · 0 citations