Author

Byung Young Park

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Open access Oct 2026

PREpiBind: Protein Representation-integrated Epitope–MHC Class II Binding Prediction

Motivation Accurate peptide–MHC class II (pMHC-II) binding prediction is complicated by MHC polymorphism and context-dependent peptide recognition. Protein representations are usually evaluated in different pipelines, obscuring their contribution to predictive performance. Results We present PREpiBind, a joint-attentio...

D.-K. Jang, Dongwoo Kim, Untaek Hwang et al. · bioRxiv · 0 citations

Open access Aug 2026

AbPACER: parent-aware, affinity-label-blind prioritization of affinity-matured scFv clones from phage-display NGS

AbPACER provides a campaign-specific, parent-aware framework for fixed-budget prioritization from affinity-label-blind phage-display NGS data and shows the highest mean recovery among learned methods in both retrospective campaigns.

Ahn Jae Chung, Byung Young Park, E. Park et al. · bioRxiv · 0 citations